53 research outputs found
Emergent spatial correlations in stochastically evolving populations
We study the spatial pattern formation and emerging long range correlations
in a model of three species coevolving in space and time according to
stochastic contact rules. Analytical results for the pair correlation
functions, based on a truncation approximation and supported by computer
simulations, reveal emergent strategies of survival for minority agents based
on selection of patterns. Minority agents exhibit defensive clustering and
cooperative behavior close to phase transitions.Comment: 11 pages, 4 figures, Adobe PDF forma
Renormalization group of probabilistic cellular automata with one absorbing state
We apply a recently proposed dynamically driven renormalization group scheme
to probabilistic cellular automata having one absorbing state. We have found
just one unstable fixed point with one relevant direction. In the limit of
small transition probability one of the cellular automata reduces to the
contact process revealing that the cellular automata are in the same
universality class as that process, as expected. Better numerical results are
obtained as the approximations for the stationary distribution are improved.Comment: Errors in some formulas have been corrected. Additional material
available at http://mestre.if.usp.br/~javie
On the critical behavior of a lattice prey-predator model
The critical properties of a simple prey-predator model are revisited. For
some values of the control parameters, the model exhibits a line of directed
percolation like transitions to a single absorbing state. For other values of
the control parameters one finds a second line of continuous transitions toward
infinite number of absorbing states, and the corresponding steady-state
exponents are mean-field like. The critical behavior of the special point T
(bicritical point), where the two transition lines meet, belongs to a different
universality class. The use of dynamical Monte-Carlo method shows that a
particular strategy for preparing the initial state should be devised to
correctly describe the physics of the system near the second transition line.
Relationships with a forest fire model with immunization are also discussed.Comment: 6 RevTex pages, 7 ps figure
Application of a renormalization group algorithm to nonequilibrium cellular automata with one absorbing state
We improve a recently proposed dynamically driven renormalization group
algorithm for cellular automata systems with one absorbing state, introducing
spatial correlations in the expression for the transition probabilities. We
implement the renormalization group scheme considering three different
approximations which take into account correlations in the stationary
probability distribution. The improved scheme is applied to a probabilistic
cellular automaton already introduced in the literature.Comment: 7 pages, 4 figures, to be published in Phys. Rev.
Phase Transitions and Spatio-Temporal Fluctuations in Stochastic Lattice Lotka-Volterra Models
We study the general properties of stochastic two-species models for
predator-prey competition and coexistence with Lotka-Volterra type interactions
defined on a -dimensional lattice. Introducing spatial degrees of freedom
and allowing for stochastic fluctuations generically invalidates the classical,
deterministic mean-field picture. Already within mean-field theory, however,
spatial constraints, modeling locally limited resources, lead to the emergence
of a continuous active-to-absorbing state phase transition. Field-theoretic
arguments, supported by Monte Carlo simulation results, indicate that this
transition, which represents an extinction threshold for the predator
population, is governed by the directed percolation universality class. In the
active state, where predators and prey coexist, the classical center
singularities with associated population cycles are replaced by either nodes or
foci. In the vicinity of the stable nodes, the system is characterized by
essentially stationary localized clusters of predators in a sea of prey. Near
the stable foci, however, the stochastic lattice Lotka-Volterra system displays
complex, correlated spatio-temporal patterns of competing activity fronts.
Correspondingly, the population densities in our numerical simulations turn out
to oscillate irregularly in time, with amplitudes that tend to zero in the
thermodynamic limit. Yet in finite systems these oscillatory fluctuations are
quite persistent, and their features are determined by the intrinsic
interaction rates rather than the initial conditions. We emphasize the
robustness of this scenario with respect to various model perturbations.Comment: 19 pages, 11 figures, 2-column revtex4 format. Minor modifications.
Accepted in the Journal of Statistical Physics. Movies corresponding to
Figures 2 and 3 are available at
http://www.phys.vt.edu/~tauber/PredatorPrey/movies
Phase Transitions and Oscillations in a Lattice Prey-Predator Model
A coarse grained description of a two-dimensional prey-predator system is
given in terms of a 3-state lattice model containing two control parameters:
the spreading rates of preys and predators. The properties of the model are
investigated by dynamical mean-field approximations and extensive numerical
simulations. It is shown that the stationary state phase diagram is divided
into two phases: a pure prey phase and a coexistence phase of preys and
predators in which temporal and spatial oscillations can be present. The
different type of phase transitions occuring at the boundary of the prey
absorbing phase, as well as the crossover phenomena occuring between the
oscillatory and non-oscillatory domains of the coexistence phase are studied.
The importance of finite size effects are discussed and scaling relations
between different quantities are established. Finally, physical arguments,
based on the spatial structure of the model, are given to explain the
underlying mechanism leading to oscillations.Comment: 11 pages, 13 figure
Analysis of a spatial Lotka-Volterra model with a finite range predator-prey interaction
We perform an analysis of a recent spatial version of the classical
Lotka-Volterra model, where a finite scale controls individuals' interaction.
We study the behavior of the predator-prey dynamics in physical spaces higher
than one, showing how spatial patterns can emerge for some values of the
interaction range and of the diffusion parameter.Comment: 7 pages, 7 figure
Spatial organization in cyclic Lotka-Volterra systems
We study the evolution of a system of interacting species which mimics
the dynamics of a cyclic food chain. On a one-dimensional lattice with N<5
species, spatial inhomogeneities develop spontaneously in initially homogeneous
systems. The arising spatial patterns form a mosaic of single-species domains
with algebraically growing size, , where
(1/2) and 1/3 for N=3 with sequential (parallel) dynamics and N=4,
respectively. The domain distribution also exhibits a self-similar spatial
structure which is characterized by an additional length scale, , with and 2/3 for N=3 and 4, respectively. For
, the system quickly reaches a frozen state with non interacting
neighboring species. We investigate the time distribution of the number of
mutations of a site using scaling arguments as well as an exact solution for
N=3. Some possible extensions of the system are analyzed.Comment: 18 pages, 10 figures, revtex, also available from
http://arnold.uchicago.edu/~ebn
Cortical Factor Feedback Model for Cellular Locomotion and Cytofission
Eukaryotic cells can move spontaneously without being guided by external
cues. For such spontaneous movements, a variety of different modes have been
observed, including the amoeboid-like locomotion with protrusion of multiple
pseudopods, the keratocyte-like locomotion with a widely spread lamellipodium,
cell division with two daughter cells crawling in opposite directions, and
fragmentations of a cell to multiple pieces. Mutagenesis studies have revealed
that cells exhibit these modes depending on which genes are deficient,
suggesting that seemingly different modes are the manifestation of a common
mechanism to regulate cell motion. In this paper, we propose a hypothesis that
the positive feedback mechanism working through the inhomogeneous distribution
of regulatory proteins underlies this variety of cell locomotion and
cytofission. In this hypothesis, a set of regulatory proteins, which we call
cortical factors, suppress actin polymerization. These suppressing factors are
diluted at the extending front and accumulated at the retracting rear of cell,
which establishes a cellular polarity and enhances the cell motility, leading
to the further accumulation of cortical factors at the rear. Stochastic
simulation of cell movement shows that the positive feedback mechanism of
cortical factors stabilizes or destabilizes modes of movement and determines
the cell migration pattern. The model predicts that the pattern is selected by
changing the rate of formation of the actin-filament network or the threshold
to initiate the network formation
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